Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903267.1_cds_XP_016453248.1_47393
CDS Infomation

[gene=LOC107777675] [db_xref=GeneID:107777675] [protein=probable inactive serine/threonine-protein kinase bub1] [protein_id=XP_016453248.1] [location=join(21827..21927,22020..22164,22244..22401,23457..23541,23627..24763)] [gbkey=CDS]
Sequence

ATGTCGATTAACACTTCAATACAGTACAATGACCTCTTCTCCTCTCTGGTCTCTGACATC
AAATCCTACAATGGCAAAGACCCTCTTTGCCCTTGGCTCCGAGGAATAAAGAAAATGAAA
GAGTCACTACCTCCGCAGCTGCTGAAGGAGAAACTGCCACGTTTTCTTCAGAAATGTGCA
CAGACTTTTGAGTCCGATCGCCGTTATGCTAATGATATGCGTTATCTTCGTGTCTGGTTA
CGACTGATGGAATATGTGGATGAGCCAAAAACGGTACTAAAAACCATGGAGTTGAATCGT
ATCGGGATGAAAAAATCTGCGTTTTACATAGCATATGCTCTTTATTATGAAAAGGTTAAA
AAGTTTGAGGCTGCGGAGAAGATGTACCGTTTGGGTGTGCAGAACCTTGCAGAGCCACTT
GATGAGTTACATAAATCATATGAGGAGTTTCTTCATCGCATGGAGCATCGTAAGAATAAG
AGGATACAGCGCCAAGAAGGAAAAAATAAAATATGTCCTCTTGGTGCTGAAAGCATCACT
TTGAAGAACAATGAGATTGAGGAAAATAATGAGAATTTAAGTGGAACAGAAAACAATCCT
ATCAGCATCAGGGATCAGTTACCCACCGCACAATCCAAGCATTTAAATATGAAAAACAAG
GTTGCCATTTCACAGGGCTACAGGAGAGAGTTTACCAGTGAAGATACAGTTGTTGTTAAA
TTTGTTGGTAATGCCATTGTTGGGAAGTCTGCTGTGGAAGATGCACGACATCATGGTCTG
GTGGAACCTACCATTAATACGAAGGAGGCCATATATACAATTAATAACATGTTTCGAGAG
CCATTAGAGCCTTCTCTGGCTGGAAAACAATCACGTCGAAACCAGCCAAAAGTTGATCAG
AGATCTAACAATGGTTTTGAGGTATTTATTGATGAAAGCACAGATGGTGTTGTTGGATCA
TCTCACCAAACCTTGGCAAATGGTTCATCGGTGCCACAAGCCACTACAGTTAAAACTCAA
GAGCCCATGCAGGAGCCATTTCTGATATTCATTGATGATGACAACACCGGCGATGTGATT
GAGGGAATTCATGAGAAGGATAAGTCAGATATGGATAACACTGACAATTTGACTGGATGT
ACTATTGAAGAGAGGATTGAGAACGGTTTTGTGTTTCCGCGTCCTTCTGATGTTACCTCA
GAATGTTCTGTTCCAAATTTTGAAAGGCCACCTCAAACAAGACTCCGTAGGGAGGACACA
GTTGTATACAAATTTGTAGGTTCCACCATTTCAGAAGAATCACAGGTCGAAAATGTTTGC
CATCATGGCCTCGTAGAACCAACAATTAACTTGAAGGAGGCTATGGATGATATTAATAGC
ATGTTCGGAAAGCCAATCGAGTTTACAAGGAAAAGCAGGCCAAAGAAACGGGAACAAGCA
CCTAAGATGGAGAGAGATGACAGTGGGTTCATGATACTTCCAGATGATGAGATACACCAT
CAACCAAAGAGTTCCCTGCCAACTTCCACGGCAGAAAGGGGAAGTGACTTGTTCGAGCAA
ACTGTGTGCACAAAGGAGGCAATGGATGACATAAATAAAATGTTTGCAATGCCACTGGAT
TTCTAA

Peptide Sequence

PEP ID

XP_016453248.1
PEP Infomation

PREDICTED: probable inactive serine/threonine-protein kinase bub1 [Nicotiana tabacum]
Sequence

MSINTSIQYNDLFSSLVSDIKSYNGKDPLCPWLRGIKKMKESLPPQLLKEKLPRFLQKCA
QTFESDRRYANDMRYLRVWLRLMEYVDEPKTVLKTMELNRIGMKKSAFYIAYALYYEKVK
KFEAAEKMYRLGVQNLAEPLDELHKSYEEFLHRMEHRKNKRIQRQEGKNKICPLGAESIT
LKNNEIEENNENLSGTENNPISIRDQLPTAQSKHLNMKNKVAISQGYRREFTSEDTVVVK
FVGNAIVGKSAVEDARHHGLVEPTINTKEAIYTINNMFREPLEPSLAGKQSRRNQPKVDQ
RSNNGFEVFIDESTDGVVGSSHQTLANGSSVPQATTVKTQEPMQEPFLIFIDDDNTGDVI
EGIHEKDKSDMDNTDNLTGCTIEERIENGFVFPRPSDVTSECSVPNFERPPQTRLRREDT
VVYKFVGSTISEESQVENVCHHGLVEPTINLKEAMDDINSMFGKPIEFTRKSRPKKREQA
PKMERDDSGFMILPDDEIHHQPKSSLPTSTAERGSDLFEQTVCTKEAMDDINKMFAMPLD
F

Transcript Sequence

Gene sequence data has not been registered.